Design, synthesis, and evaluation of pyrrolidine based CXCR4 antagonists with in vivo anti-tumor metastatic activity

Eur J Med Chem. 2020 Nov 1:205:112537. doi: 10.1016/j.ejmech.2020.112537. Epub 2020 Jul 23.

Abstract

The chemokine receptor CXCR4 has been proposed as a drug target based on its important functions in HIV infection, inflammation/autoimmune diseases and cancer metastasis. Herein we report the design, synthesis and evaluation of novel CXCR4 antagonists based on a pyrrolidine scaffold. The structural exploration/optimization identified numerous potent CXCR4 antagonists, represented by compound 46, which displayed potent binding affinity to CXCR4 receptor (IC50 = 79 nM competitively displacing fluorescent 12G5 antibody) and inhibited CXCL12 induced cytosolic calcium flux (IC50 = 0.25 nM). Moreover, in a transwell invasion assay, compound 46 significantly mitigated CXCL12/CXCR4 mediated cell migration. Compound 46 exhibited good physicochemical properties (MW 367, logD7.4 1.12, pKa 8.2) and excellent in vitro safety profiles (e.g., hERG patch clamp IC50 > 30 μM and minimal CYP isozyme inhibition). Importantly, 46 displayed much improved metabolic stability in human and rat liver microsomes. Lastly, 46 demonstrated marked efficacy in a cancer metastasis model in mice. These results strongly support 46 as a prototypical lead for the development of promising CXCR4 antagonists as clinical candidates.

Keywords: Antagonist; CXCL12; CXCR4; Chemokine; GPCR.

MeSH terms

  • Animals
  • Antineoplastic Agents / chemical synthesis*
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology*
  • Calcium / metabolism
  • Cell Line, Tumor
  • Chemistry Techniques, Synthetic
  • Cytosol / drug effects
  • Cytosol / metabolism
  • Drug Design*
  • Humans
  • Mice
  • Neoplasm Metastasis
  • Pyrrolidines / chemical synthesis*
  • Pyrrolidines / chemistry
  • Pyrrolidines / pharmacology*
  • Rats
  • Receptors, CXCR4 / antagonists & inhibitors*

Substances

  • Antineoplastic Agents
  • CXCR4 protein, human
  • Pyrrolidines
  • Receptors, CXCR4
  • pyrrolidine
  • Calcium